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Photo: UiT
Lars Ailo Bongo.jpg
Department of Computer Science lars.ailo.bongo@uit.no +4777644121 Tromsø REALF A 215

Lars Ailo Bongo

Professor

  • Pedersen, Bjørn-Richard; Holsbø, Einar; Andersen, Trygve; Shvetsov, Nikita; Ravn, Johan; Sommerseth, Hilde Leikny; Bongo, Lars Ailo. Lessons Learned Developing and Using a Machine Learning Model to Automatically Transcribe 2.3 Million Handwritten Occupation Codes. (data) Historical Life Course Studies 2022; Volum 11. ISSN 2352-6343.s 1 - 17.s doi: 10.51964/hlcs11331.
  • Fjukstad, Bjørn; Shvetsov, Nikita; Nøst, Therese Haugdahl; Bøvelstad, Hege Marie; Halbach, Till; Holsbø, Einar; Hansen, Knut; Bongo, Lars Ailo. Reproducible Data Management and Analysis using R. Universitetsforlaget 2020 ISBN 978-82-15-04119-3.s 48 - 62.s doi: 10.18261/9788215041193-2020-03.
  • Holsbø, Einar; Perduca, Vittorio; Bongo, Lars Ailo; Lund, Eiliv; Birmelé, Etienne. Predicting breast cancer metastasis from whole-blood transcriptomic measurements. BMC Research Notes 2020; Volum 13 (1). ISSN 1756-0500.s doi: 10.1186/s13104-020-05088-0.
  • Arnes, Jo Inge; Bongo, Lars Ailo. The Beauty of Complex Designs. Universitetsforlaget 2020 ISBN 978-82-15-04119-3.s 23 - 47.
  • Voets, Mike; Møllersen, Kajsa; Bongo, Lars Ailo. Reproduction study using public data of: Development and validation of a deep learning algorithm for detection of diabetic retinopathy in retinal fundus photographs. PLOS ONE 2019; Volum 14 (6). ISSN 1932-6203.s doi: 10.1371/journal.pone.0217541.
  • Jacome, Cristina; Ravn, Johan; Holsbø, Einar; Aviles Solis, Juan Carlos; Melbye, Hasse; Bongo, Lars Ailo. Convolutional Neural Network for Breathing Phase Detection in Lung Sounds. Sensors 2019; Volum 19 (8). ISSN 1424-8220.s 1 - 10.s doi: 10.3390/s19081798.
  • Fjukstad, Bjørn; Angelvik, Nina; Grønnesby, Morten; Hauglann, maria wulff; Gunhildrud, Hedinn; Rasch, Fredrik Høisæther; Iversen, Julianne; Dalseng, Margaret; Bongo, Lars Ailo. Teaching Electronics and Programming in Norwegian Schools Using the air:bit Sensor Kit. Association for Computing Machinery (ACM) 2019 ISBN 978-1-4503-6895-7.s 374 - 380.s doi: 10.1145/3304221.3325527.
  • Agafonov, Aleksander; Mattila, Kimmo; Tuan, Cuong Duong; Tiede, Lars; Raknes, Inge Alexander; Bongo, Lars Ailo Aslaksen. META-pipe cloud setup and execution. F1000 Research 2018; Volum 6. ISSN 2046-1402.s doi: 10.12688/f1000research.13204.3.
  • Tekle, Kidane M; Gundersen, Sveinung; Klepper, Kjetil; Bongo, Lars Ailo; Raknes, Inge Alexander; Li, Xiaxi; Zhang, Wei; Andreetta, Christian; Mulugeta, Teshome Dagne; Kalaš, Matúš; Rye, Morten Beck; Hjerde, Erik; Antony Samy, Jeevan Karloss; Fornous, Ghislain; Azab, Abdulrahman; Våge, Dag Inge; Hovig, Eivind; Willassen, Nils Peder; Drabløs, Finn; Nygård, Ståle; Petersen, Kjell; Jonassen, Inge. Norwegian e-Infrastructure for Life Sciences (NeLS). F1000 Research 2018; Volum 7:968. ISSN 2046-1402.s doi: 10.5256/f1000research.16472.r35600.
  • Bongo, Lars Ailo; Raknes, Inge Alexander. META-pipe Authorization service. F1000 2018; Volum 7. ISSN 1759-796X.s doi: 10.12688/f1000research.13256.2.
  • Fjukstad, Bjørn; Angelvik, Nina; Hauglann, maria wulff; Knutsen, Joachim Sveia; Grønnesby, Morten; Gunhildrud, Hedinn; Bongo, Lars Ailo. Low-Cost Programmable Air Quality Sensor Kits in Science Education. ACM Publications 2018 ISBN 978-1-4503-5103-4.s 227 - 232.s doi: 10.1145/3159450.3159569.
  • Robertsen, Espen Mikal; Denise, Hubert; Mitchell, Alex; Finn, Robert D; Bongo, Lars Ailo Aslaksen; Willassen, Nils Peder. ELIXIR pilot action: Marine metagenomics - towards a domain specific set of sustainable services. F1000 2017; Volum 6. ISSN 1759-796X.s doi: 10.12688/f1000research.10443.1.
  • Pedersen, Edvard; Bongo, Lars Ailo. Large-scale biological meta-database management. Future generations computer systems 2017; Volum 67. ISSN 0167-739X.s 481 - 489.s doi: 10.1016/j.future.2016.02.010.
  • Ravn, Johan; Solis, Juan Carlos Aviles; Grønnesby, Morten; Melbye, Hasse; Bongo, Lars Ailo. Detection of Wheezes and Breathing Phases Using Deep Convolutional Neural Networks. 2017 ISBN 978-82-8378-003-1.s 24 - 26.
  • Grønnesby, Morten; Solis, Juan Carlos Aviles; Holsbø, Einar; Melbye, Hasse; Bongo, Lars Ailo. Machine Learning Based Crackle Detection. 2017 ISBN 978-82-8378-003-1.s 27 - 27.
  • ten Hoopen, Petra; Finn, Robert D.; Bongo, Lars Ailo; Corre, Erwan; Fosso, Bruno; Meyer, Folker; Mitchell, Alex; Pelletier, Eric; Pesole, Graziano; Santamaria, Monica; Willassen, Nils Peder; Cochrane, Guy. The metagenomic data life-cycle: standards and best practices.. GigaScience 2017; Volum 6 (8). ISSN 2047-217X.s 1 - 11.s doi: 10.1093/gigascience/gix047.
  • Dumeaux, Vanessa; Fjukstad, Bjørn; Fjøsne, Hans Erikssønn; Frantzen, Jan Ole; Holmen, Marit Muri; Rodegerdts, Enno; Schlichting, Ellen; Børresen-Dale, Anne-Lise; Bongo, Lars Ailo; Lund, Eiliv; Hallett, Michael. Interactions between the tumor and the blood systemic response of breast cancer patients. PLoS Computational Biology 2017; Volum 13 (9:e1005680). ISSN 1553-734X.s 1 - 27.s doi: 10.1371/journal.pcbi.1005680.
  • Raknes, Inge Alexander; Fjukstad, Bjørn; Bongo, Lars Ailo Aslaksen. nsroot: Minimalist process isolation tool implemented with Linux namespaces. (fulltekst) NIKT: Norsk IKT-konferanse for forskning og utdanning 2017. ISSN 1892-0713.
  • Pedersen, Edvard; Bongo, Lars Ailo. Big Biological Data Management. Springer 2016 ISBN 978-3-319-44881-7.s 265 - 278.s doi: 10.1007/978-3-319-44881-7_13.
  • Pedersen, Edvard; Raknes, Inge Alexander; Ernstsen, Martin; Bongo, Lars Ailo. Integrating Data-Intensive Computing Systems with Biological Data Analysis Frameworks. IEEE 2015 (1066-6192) ISBN 978-1-4799-8490-9. ISSN 1066-6192.s 733 - 740.s doi: 10.1109/PDP.2015.106.
  • Kåven, Ove Henrik; Bongo, Lars Ailo. MORTAL - Multiparadigm Optimizing Retargetable Transdisciplinary Abstraction Language. NIKT: Norsk IKT-konferanse for forskning og utdanning 2015. ISSN 1892-0713.
  • Fjukstad, Bjørn; Olsen, Karina Standahl; Jareid, Mie; Lund, Eiliv; Bongo, Lars Ailo. Kvik: three-tier data exploration tools for flexible analysis of genomic data in epidemiological studies. F1000 Research 2015; Volum 4:81. ISSN 2046-1402.s doi: 10.12688/f1000research.6238.2.
  • Bongo, Lars Ailo; Pedersen, Edvard; Ernstsen, Martin. Data-intensive computing infrastructure systems for unmodified biological data analysis pipelines. Lecture Notes in Computer Science (LNCS) 2015; Volum 8623. ISSN 0302-9743.s 259 - 272.s doi: 10.1007/978-3-319-24462-4_22.
  • Mihajlovic, Milan; Bongo, Lars Ailo; Ciegis, Raimondas; Frasheri, Neki; Kimovski, Dragi; Kropf, Peter; Margenov, Svetozar; Neytcheva, Maya; Rauber, Thomas; Runger, Gudula; Trobec, Roman; Wuyts, Roel; Wyrzykowski, Roman; Gong, Jing. Applications for Ultrascale Computing. Supercomputing frontiers and innovations 2015; Volum 2 (1). ISSN 2313-8734.s 19 - 48.s doi: 10.14529/jsfi150102.
  • Pedersen, Edvard; Willassen, Nils Peder; Bongo, Lars Ailo. Transparent Incremental Updates for Genomics Data Analysis Pipelines. Springer 2014 (8374) ISBN 978-3-642-54419-4. ISSN 0302-9743.s 311 - 320.s doi: 10.1007/978-3-642-54420-0_31.
  • Fjukstad, Bjørn; Olsen, Karina Standahl; Jareid, Mie; Lund, Eiliv; Bongo, Lars Ailo. Kvik: Interactive exploration of genomic data from the NOWAC postgenome biobank. NIKT: Norsk IKT-konferanse for forskning og utdanning 2014. ISSN 1892-0713.s doi: 10.12688/f1000research.6238.1.
  • Tartari, Giacomo; Tiede, Lars; Holsbø, Einar; Knudsen, Kenneth; Raknes, Inge Alexander; Fjukstad, Bjørn; Mode, Nicolle; Bjørndalen, John Markus; Lund, Eiliv; Bongo, Lars Ailo. Mr. Clean: A Tool for Tracking and Comparing the Lineage of Scientific Visualization Code. IEEE 2014 ISBN 978-0-7695-5305-4.s 75 - 78.s doi: 10.1109/vissoft.2014.21.
  • Bongo, Lars Ailo; Pedersen, Edvard; Ernstsen, Martin. Data-intensive computing infrastructure systems for unmodified biological data analysis pipelines. 2014 ISBN 9788890643743.s doi: 10.1007/978-3-319-24462-4_22.
  • Ernstsen, Martin; Kjærner-Semb, Erik Nordtorp; Willassen, Nils Peder; Bongo, Lars Ailo. Mario: Interactive Tuning of Biological Analysis Pipelines Using Iterative Processing. Springer 2014; Volum 8805 (Part 1) ISBN 978-3-319-14324-8. ISSN 0302-9743.s 263 - 274.s doi: 10.1007/978-3-319-14325-5_23.
  • Bongo, Lars Ailo. Bulk synchronous visualization. (fulltekst) Association for Computing Machinery (ACM) 2013 ISBN 978-1-4503-1908-9.s 21 - 30.s doi: 10.1145/2442992.2442995.
  • Park, Christopher Y.; Wong, Aaron K.; Greene, Casey S.; Rowland, Jessica; Guan, Yuanfang; Bongo, Lars Ailo; Burdine, Rebecca D.; Troyanskaya, Olga. Functional Knowledge Transfer for High-accuracy Prediction of Under-studied Biological Processes. PLoS Computational Biology 2013; Volum 9 (3). ISSN 1553-734X.s doi: 10.1371/journal.pcbi.1002957.
  • Anshus, Otto; Stødle, Daniel; Hagen, Tor-Magne Stien; Fjukstad, Bård; Bongo, Lars Ailo; Bjørndalen, John Markus; Liu, Yong; Tiede, Lars. Nine Years of the Tromsø Display Wall. (fulltekst) Association for Computing Machinery (ACM) 2013 ISBN 978-1-4503-1952-2.
  • Pedersen, Edvard; Willassen, Nils Peder; Bongo, Lars Ailo. GeStore – Incremental Computation for Metagenomic Pipelines. NIKT: Norsk IKT-konferanse for forskning og utdanning 2012. ISSN 1892-0713.s 251 - 254.
  • Bongo, Lars Ailo. BSV - 1000 Window Visualization System. NIKT: Norsk IKT-konferanse for forskning og utdanning 2012. ISSN 1892-0713.s 255 - 258.
  • Wong, Aaron K.; Park, Christopher Y.; Greene, Casey S.; Bongo, Lars Ailo; Guan, Yuanfang; Troyanskaya, Olga. IMP: a multi-species functional genomics portal for integration, visualization and prediction of protein functions and networks. Nucleic Acids Research (NAR) 2012; Volum 40 (W1). ISSN 0305-1048.s W484 - W490.s doi: 10.1093/nar/gks458.
  • Johansen, Terje Andre; Stødle, Daniel; Bongo, Lars Ailo. A Web Application Widget Library for Scalable Interactive Biological Data Visualization. NIKT: Norsk IKT-konferanse for forskning og utdanning 2011. ISSN 1892-0713.s 109 - 120.
  • Josephson, William K.; Bongo, Lars Ailo; Flynn, David; Li, Kai. DFS: A file system for virtualized flash storage. ACM Transactions on Storage 2010; Volum 6 (3). ISSN 1553-3077.
  • Josephson, William K.; Bongo, Lars Ailo; Flynn, David; Li, Kai. DFS: A File System for Virtualized Flash Storage. USENIX - The Advanced Computing Systems Association 2010 ISBN 978-1-931971-74-4.
  • Josephson, William K.; Bongo, Lars Ailo; Flynn, David; Li, Kai. DFS: a file system for virtualized flash storage. Login: The Usenix Magazine 2010; Volum 35 (2). ISSN 1044-6397.s 37 - 47.
  • Bongo, Lars Ailo; Wallace, Grant; Larsen, Tore; Li, Kai; Troyanskaya, Olga. Systems Support for Remote Visualization of Genomics Applications over Wide Area Networks. Springer 2007 (4360/2007) ISBN 978-3-540-69841-8. ISSN 0302-9743.s 157 - 174.
  • Bongo, Lars Ailo; Vinter, Brian; Anshus, Otto; Larsen, Tore; Bjørndalen, John Markus. Using Overdecomposition to Overlap Communication Latencies with Computation and Take Advantage of SMT Processors. IEEE 2006 ISBN 0-7695-2637-3.s 239 - 247.
  • Bongo, Lars Ailo; Anshus, Otto; Bjørndalen, John Markus. Low Overhead High Performance Runtime Monitoring of Collective Communication. IEEE 2005 ISBN 0-7695-2380-3.s 455 - 464.
  • Anshus, Otto; Bjørndalen, John Markus; Bongo, Lars Ailo. Experiences Parallelizing, Configuring, and Monitoring of Parallel Applications on Clusters. Elsevier 2004 ISBN 0-444-51689-1.s 879 - 886.
  • Bongo, Lars Ailo; Anshus, Otto; Bjørndalen, John Markus. Collective communication performance analysis within the communication system. Lecture Notes in Computer Science (LNCS) 2004; Volum 3149. ISSN 0302-9743.s 163 - 172.
  • Bongo, Lars Ailo; Anshus, Otto; Bjørndalen, John Markus; Larsen, Tore. Extending Collective Operations with Application Semantics for Improving Multi-cluster Performance. IEEE 2004 ISBN 0-7695-2210-6.s 320 - 327.
  • Stensen, Dina Benedicte Berg; Bongo, Lars Ailo; Olsen, Karina; Hanssen, Anne Merethe. Social network analysis of Staphylococcus aureus carriage in a general youth population. 2003.s doi: 10.48550/arXiv.2202.08794.
  • Bongo, Lars Ailo; Anshus, Otto; Bjørndalen, John Markus. EventSpace - Exposing and Observing Communication Behavior of Parallel Cluster Applications. Springer 2003; Volum 2790 (1) ISBN 3-540-40788-X. ISSN 0302-9743.s 47 - 56.
  • Bongo, Lars Ailo; Anshus, Otto; Bjørndalen, John Markus. Using a Virtual Event Space to Understand Parallel Application Communication Behavior. Tapir Akademisk Forlag 2003 ISBN 82-519-1916-9.
  • Bjørndalen, John Markus; Anshus, Otto; Larsen, Tore; Bongo, Lars Ailo; Vinter, Brian. Scalable Processing and Communication Performance in a Multi-Media Related Context. Proceedings of the EUROMICRO Conference 2002. ISSN 1089-6503.s 200 - 206.
  • Bjørndalen, John Markus; Bongo, Lars Ailo; Haugland, Dag; Hjelmås, Erik; Løkketangen, Arne; Møller-Pedersen, Birger; Prinz, Andreas; Runde, Ragnhild Kobro; Sandnes, Frode Eika; Aalberg, Trond. Norsk Informatikkonferanse NIK 2011. Tapir Akademisk Forlag 2011 (NIK 2011) ISBN 978-82-519-2843-4. ISSN 1892-0713.s 61 - 72.
  • Bongo, Lars Ailo; Pedersen, Bjørn-Richard; Holsbø, Einar; Andersen, Trygve; Teige, Tim Alexander; Shvetsov, Nikita; Ravn, Johan; Thorvaldsen, Gunnar; Sommerseth, Hilde Leikny. Automated approaches for Transcription of 20th Century Norwegian Census Microdata - Lessons Learned. European Social Science History Conference 2021-03-24 - 2021-03-27 2021.
  • Stensen, Dina Benedicte Berg; Cañadas, Rafael A. Nozal; Småbrekke, Lars; Olsen, Karina; Nielsen, Christopher Sivert; Svendsen, Kristian; Hanssen, Anne Merethe; Sollid, Johanna Ericson; Simonsen, Gunnar Skov; Bongo, Lars Ailo; Furberg, Anne-Sofie. Social network analysis of Staphylococcus aureus carriage in a general youth population. NSCMID2021 2021-09-03 - 2021-09-06 2021.
  • Fjukstad, Bjørn; Angelvik, Nina; Grønnesby, Morten; Hauglann, maria wulff; Gunhildrud, Hedinn; Rasch, Fredrik Høisæther; Iversen, Julianne; Dalseng, Margaret; Bongo, Lars Ailo. Teaching Electronics and Programming in Norwegian Schools Using the Air: Bit Sensor Kit. ITiCSE '19: 2019 ACM Conference on Innovation and Technology in Computer Science Education 2019-07-15 - 2019-07-17 2019.
  • Fjukstad, Bjørn; Angelvik, Nina; Hauglann, maria wulff; Knutsen, Joachim Sveia; Grønnesby, Morten; Gunhildrud, Hedinn; Bongo, Lars Ailo. Low-Cost Programmable Air Quality Sensor Kits in Science Education. 49th ACM Technical Symposium on Computer Science Education 2018-02-21 - 2018-02-24 2018.
  • Fjukstad, Bjørn; Dumeaux, Vanessa; Olsen, Karina Standahl; Lund, Eiliv; Hallett, Michael; Bongo, Lars Ailo. Building Applications For Interactive Data Exploration In Systems Biology. The 8th ACM International Conference on Bioinformatics, Computational Biology,and Health Informatics 2017-08-20 - 2017-08-23 2017.
  • Raknes, Inge Alexander; Fjukstad, Bjørn; Bongo, Lars Ailo Aslaksen. nsroot: Minimalist process isolation tool implemented with Linux namespaces. Norsk Informatikkonferanse 2017 2017-11-27 - 2017-11-29 2017.
  • Bongo, Lars Ailo. WP6: Marine metagenomics. Elixir WP4 meeting 2016-01-26 - 2016-01-26 2016.
  • Agafonov, Aleksander; Bongo, Lars Ailo; Raknes, Inge Alexander. ELIXIR Compute platform. Webinar, Elixir (data) 2016-11-16 - 2016-11-16 2016.
  • Bongo, Lars Ailo. Our cloud usage - and not. Uninett Faggruppe for skyteknologi 2016-11-16 - 2016-11-16 2016.
  • Bongo, Lars Ailo. Virtual reality. Norstruct seminar 2016-10-05 - 2016-10-05 2016.
  • Bongo, Lars Ailo. META-pipe: marine metagenomics service. ELIXIR Innovation and SME Forum: Data-driven innovation in the aquaculture and marine industries 2016-05-13 - 2016-05-13 2016.
  • Bongo, Lars Ailo. Machine learning. NOTCH seminar, University of Tromsø 2016-03-18 - 2016-03-18 2016.
  • Bongo, Lars Ailo. Compute and storage requirements for META-pipe. Flash talk. ELIXIR all-hands meeting 2016-03-08 - 2016-03-08 2016.
  • Bongo, Lars Ailo. Center for Bioinformatics (SfB). Presentasjon ved IFI, UiT 2016-02-10 - 2016-02-10 2016.
  • Bongo, Lars Ailo. NELS - Overview and recent developments. NBS contact meeting 2016-01-23 - 2016-01-23 2016.
  • Bongo, Lars Ailo. Marine metagenomic infrastructure services as driver for research and industrial innovation. Elixir Compute Platforms Workshop 2015-03-18 - 2015-03-18 2015.
  • Pedersen, Edvard; Raknes, Inge Alexander; Ernstsen, Martin; Bongo, Lars Ailo. Integrating Data-Intensive Computing Systems with Biological Data Analysis Frameworks. 23rd Euromicro International Conference on Parallel, Distributed, and Network-Based Processing 2015-03-04 - 2015-03-06 2015.
  • Zhu, Qian; Wong, Aaron K.; Krishnan, Arjun S.; Aure, Miriam Ragle; Tadych, Alicja; Zhang, Ran; Corney, David C.; Greene, Casey S.; Bongo, Lars Ailo; Kristensen, Vessela N.; Charikar, Moses; Li, Kai; Troyanskaya, Olga G.. Targeted exploration and analysis of large cross-platform human transcriptomic compendia. Nature Methods 2015; Volum 12 (3). ISSN 1548-7091.s 211 - 214.s doi: 10.1038/nmeth.3249.
  • Fjukstad, Bjørn; Olsen, Karina Standahl; Jareid, Mie; Lund, Eiliv; Bongo, Lars Ailo. Interactive omics data exploration in epidemiological studies. Norsk Epidemiologi, Supplement 2015; Volum 25. ISSN 0803-4206.s 109 - 109.
  • Fjukstad, Bjørn; Olsen, Karina Standahl; Jareid, Mie; Lund, Eiliv; Bongo, Lars Ailo. Interactive omics data exploration in epidemiological studies. The 7th Conference on Epidemiology and Registry-Based Health Research - NordicEpi 2015 2015-09-21 - 2015-09-23 2015.
  • Kåven, Ove Henrik; Bongo, Lars Ailo. MORTAL - Multiparadigm Optimizing Retargetable Transdisciplinary Abstraction Language. NIK 2015 - Norsk Informatikkonferanse 2015-11-23 - 2015-11-25 2015.
  • Pedersen, Edvard; Bongo, Lars Ailo. Large-scale Biological Meta-database Management. (data) 2015.
  • Bongo, Lars Ailo. Big Biological Data. Nettverksmøte Tromsø: Store Biologiske Datasett (data) 2015-09-08 - 2015-09-08 2015.
  • Bongo, Lars Ailo. META-pipe. WP6 - Elixir-Excelerate Kick-Off Meeting (data) 2015-08-01 - 2015-08-01 2015.
  • Ernstsen, Martin; Kjærner-Semb, Erik Nordtorp; Willassen, Nils Peder; Bongo, Lars Ailo. Mario: Interactive Tuning of Biological Analysis Pipelines Using Iterative Processing. Euro-Par 2014 Parallel Processing 20th International Conference 2014-08-25 - 2014-08-29 2014.
  • Fjukstad, Bjørn; Olsen, Karina Standahl; Jareid, Mie; Lund, Eiliv; Bongo, Lars Ailo. Kvik: Interactive exploration of genomic data from the NOWAC postgenome biobank. Norsk Informatikkonferanse 2014 2014-11-17 - 2014-11-19 2014.
  • Tartari, Giacomo; Tiede, Lars; Holsbø, Einar; Knudsen, Kenneth; Raknes, Inge Alexander; Fjukstad, Bjørn; Mode, Nicolle; Bjørndalen, John Markus; Lund, Eiliv; Bongo, Lars Ailo. Mr. Clean: A Tool for Tracking and Comparing the Lineage of Scientific Visualization Code. 2nd IEEE Working Conference on Software Visualization 2014-09-29 - 2014-09-30 2014.
  • Tartari, Giacomo; Tiede, Lars; Holsbø, Einar; Knudsen, Kenneth; Raknes, Inge Alexander; Fjukstad, Bjørn; Mode, Nicolle; Bjørndalen, John Markus; Lund, Eiliv; Bongo, Lars Ailo. Mr. Clean: A Tool for Tracking and Comparing the Lineage of Scientific Visualization Code. 2nd IEEE Working Conference on Software Visualization 2014-09-20 - 2014-09-30 2014.
  • Bongo, Lars Ailo; Pedersen, Edvard; Ernstsen, Martin. Data-intensive computing infrastructure systems for unmodified biological data analysis pipelines. Eleventh International Meeting on Computational Intelligence Methods for Bioinformatics and Biostatistics CIBB 2014 2014-06-26 - 2014-06-28 2014.
  • Fjukstad, Bjørn; Bongo, Lars Ailo; Lund, Eiliv. Kvik: Interactive exploration of genomic data from the NOWAC postgenome biobank. 2014.
  • Pedersen, Edvard; Willassen, Nils Peder; Bongo, Lars Ailo. Transparent Incremental Updates for Genomics Data Analysis Pipelines. 4th International Workshop on High Performance Bioinformatics and Biomedicine (HiBB) 2013-08-26 - 2013-08-30 2013.
  • Bongo, Lars Ailo. Bulk synchronous visualization. 2013 International Workshop on Programming Models and Applications for Multicores and Manycores 2013-02-23 - 2013-02-23 2013.
  • Anshus, Otto; Stødle, Daniel; Hagen, Tor-Magne Stien; Fjukstad, Bård; Bjørndalen, John Markus; Bongo, Lars Ailo; Liu, Yong; Tiede, Lars. Nine Years of the Tromsø Display Wall. POWERWALL - CHI 2013 Workshop on Interactive, Ultra-High-Resolution Displays 2013-04-27 - 3013-04-27 2013.
  • Pedersen, Edvard; Bongo, Lars Ailo; Willassen, Nils Peder. GeStore - Incremental Computation for Metagenomic Pipelines. 2012.
  • Bongo, Lars Ailo. BSV - 1000 Window Visualization System. Norsk Informatikkonferanse NIK 2012 2012-11-19 - 2012-12-21 2012.
  • Pedersen, Edvard; Willassen, Nils Peder; Bongo, Lars Ailo. GeStore – Incremental Computation for Metagenomic Pipelines. Norsk informatikkonferanse NIK 2012 2012-11-19 - 2012-11-21 2012.
  • Bongo, Lars Ailo. Bulk Synchronous Visualization. 2nd IEEE Symposium on Biological Data Visualization 2012-10-14 - 2012-10-15 2012.
  • Pedersen, Edvard; Willassen, Nils Peder; Bongo, Lars Ailo. GeStore - Incremental Computations for Metagenomic Pipelines. The 11th Annual Meeting on High Performance Computing and Infrastructure in Norway - NOTUR 2012 2012-06-14 - 2012-06-15 2012.
  • Pedersen, Edvard; Willassen, Nils Peder; Bongo, Lars Ailo. GeStore - Incremental Computations for Metagenomic Pipelines. Norsk Bioinformatikk Forum 2012-10-18 - 2012-10-19 2012.
  • Johansen, Terje Andre; Bongo, Lars Ailo; Stødle, Daniel. A scalable, interactive widget library for visualizing biological data. 2011.
  • Johansen, Terje Andre; Stødle, Daniel; Bongo, Lars Ailo. A Web Application Widget Library for Scalable Interactive Biological Data Visualization. Norsk Informatikkonferanse NIK 2011 2011-11-21 - 2011-11-23 2011.
  • Anshus, Otto; Bongo, Lars Ailo; Ha, Hoai Phuong; Henriksen, Torje Starbo. Efficient Intra-node Communication for Chip Multiprocessors. 2008.
  • Bongo, Lars Ailo; Anshus, Otto; Vinter, Brian. Reducing the Network Latency and Bandwidth Requirements of Parallel and Distributed Applications. 2008 ISBN 978-82-92461-82-2.
  • Bongo, Lars Ailo; Stødle, Daniel; Wallace, Grant; Larsen, Tore; Li, Kai; Troyanskaya, Olga. System Support for Collaborative Genomics Visualizations. 16th International Conference on Intelligent Systems for Molecular Biology 2008-07-17 - 2008-07-23 2008.
  • Bongo, Lars Ailo. Adaptive Video Compression. Prøveforelesning til PhD-graden 2008-01-18 - 2008-01-18 2008.
  • Bongo, Lars Ailo. Reducing the Network Latency and Bandwidth Requirements of Parallel and Distributed Applications. Kjernekompetanse og verdiskaping i IKT (VERDIKT) 2007 2007-10-29 - 2007-10-30 2007.
  • Bongo, Lars Ailo; Wallace, Grant; Larsen, Tore; Li, Kai; Troyanskaya, Olga. Systems Support for Remote Visualization of Genomics Applications over Wide Area Networks. International Workshop, GCCB 2006 2007-01-21 - 2007-01-24 2007.
  • Bongo, Lars Ailo; Li, Kai; Troyanskaya, Olga; Wallace, Grant; Larsen, Tore. Application Specific Compression for Remote Visualization of Genomics Applications. Rutgers-Helsinki Ph.D. Student Workshop on Spontaneous Networking 2006 2006-05-08 - 2006-05-12 2006.
  • Bongo, Lars Ailo; Vinter, Brian; Anshus, Otto; Larsen, Tore; Bjørndalen, John Markus. Using Overdecomposition to Overlap Communication Latencies with Computation and Take Advantage of SMT Processors. 2006 International Conference on Parallel Processing Workshops 2006-08-14 - 2006-08-18 2006.
  • Bongo, Lars Ailo; Li, Kai; Troyanskaya, Olga; Wallace, Grant; Larsen, Tore. Application Specific Compression for Remote Visualization of Genomics Applications. Workshop on state-of-the-art in scientific and parallel computing (Para'06) 2006-06-18 - 2006-06-21 2006.
  • Bongo, Lars Ailo. The Longcut Wide Area Network Emulator: Design and Evaluation. 2005; Volum 2005 (53).
  • Bongo, Lars Ailo; Anshus, Otto; Bjørndalen, John Markus. Low Overhead High Performance Runtime Monitoring of Collective Communication. The 2005 International Conference on Parallel Processing (ICPP-05) 2005-06-14 - 2005-06-17 2005.
  • Bongo, Lars Ailo; Anshus, Otto; Bjørndalen, John Markus; Larsen, Tore. Extending Collective Operations with Application Semantics for Improving Multi-cluster Performance. Third International Workshop on Algorithms, Models and Tools for Parallel Computing on Heterogeneous Networks (HeteroPar04) 2004-07-05 - 2004-07-07 2004.
  • Bongo, Lars Ailo; Anshus, Otto; Bjørndalen, John Markus. Collective communication performance analysis within the communication system. Euro-Par 2004 2004-08-31 - 2004-09-03 2004.
  • Bongo, Lars Ailo; Anshus, Otto; Bjørndalen, John Markus. Evaluating the Performance of the Allreduce Collective Operation on Clusters: Approach and Results. 2004; Volum 2004 (48).
  • Johnsen, Espen S.; Anshus, Otto; Bjørndalen, John Markus; Bongo, Lars Ailo. Survey of execution monitoring tools for computer clusters. 2003.
  • Bongo, Lars Ailo. Dynamically adapting communication behavior of parallel applications. NOTUR gathering 2003-05-14 - 2003-05-15 2003.
  • Bongo, Lars Ailo; Anshus, Otto; Bjørndalen, John Markus. Experiences Visualizing Multi-cluster Parallel Applications. Seminar in Computer Graphics 2003-03-03 - 2003-03-04 2003.
  • Bongo, Lars Ailo; Anshus, Otto; Bjørndalen, John Markus. Performance Monitoring. A Report for the NOTUR Project Emerging Technologies: Cluster. 2003.
  • Bongo, Lars Ailo; Anshus, Otto; Bjørndalen, John Markus. Using a Virtual Event Space to Understand Parallel Application Communication Behavior. 2003; Volum 2003 (44).
  • Johnsen, Espen S.; Anshus, Otto; Bjørndalen, John Markus; Bongo, Lars Ailo. Survey of optimizing techniques for parallel programs running on computer clusters. 2003.
  • Bjørndalen, John Markus; Anshus, Otto; Larsen, Tore; Bongo, Lars Ailo; Vinter, Brian. Scalable Processing and Communication Performance in a Multi-Media Related Context. 28th EuroMicro Conference (sammendrag) 2002-09-04 - 2002-09-06 2002.
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