Modelling in Systems Biology I -Metabolic pathway modelling
About the course
Single course PhD, master students can participate if sufficient places are available (BIO-3010).
The course will be arranged with a minimum number of 4 students. Maximum participants: 10
Modelling is an important tool in current biology. It is widely used to help experimental design, in drug target prediction and in the prediction of disease related changes. We will focus on the modelling of metabolic pathways in this course, especially on the reconstruction of kinetic models and simulation techniques. We will discuss limitation of modelling approaches due to limited parameter availability and perform parameter estimation based on available experimental data. In the practical part students will be introduced to different programs available for stoichiometric and kinetic modelling. The integration of gene expression data into the modelling approach will be an essential part of the course. Furthermore, several related databases such as BioCyc, KEGG, BRENDA and Biomodels will be introduced during the course.
Admission requirements
Who can apply as a singular course student:
- PhD student enrolled at another institution than UiT. PhD students must upload a document from their university stating that they are registered PhD students. This group of applicants does not have to prove English proficiency and are exempt from semester fee.
- Holders of a master´s degree of five years or 3+2 years (or equivalent) may be admitted. These applicants must upload a Master´s Diploma with Diploma Supplement / English translation of the diploma. Applicants from listed countries must document proficiency in English. To find out if this applies to you, see the following list: Proficiency in English must be documented - list of countries. For more information on accepted English proficiency tests and scores, as well as exemptions from the English proficiency tests, please see the following document: Proficiency in english - PhD level studies
The course has 10 seats. If the number of applicants exceeds the number of places available, applicants will be ranked in this order: 1. PhD students at UiT 2. Participants in the Associate Professor programme at UiT (must hold a Master´s degree) 3. Registered PhD students from other universities 4. Applicants documenting that they have a Norwegian Master´s degree (or equivalent) The course will be cancelled if less than four participants.
Objectives of the course
Teaching methods
Intensive course 1 week, 40 hours combined lectures and computer practicals
Course will take place in January.
Language of instruction and examination
EnglishApplication deadline
Examination
| Assignment | Hand in: 10.03.2023 14:00 Duration: 1 Semesters |
Grade: Passed / Not Passed |
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