1
Trym Thune Flygel,
Ahmed Bargheet,
Regina Esinam Abotsi,
Shantelle Claassen-Weitz,
Victoria Simms,
Erik Hjerde
et al.:
Effect of long-term azithromycin treatment on gut microbial diversity in children and adolescents with HIV-associated chronic lung disease
1
Greta Daae Sandsdalen,
Animesh Kumar,
Erik Hjerde
:
Exploring the Frozen Armory: Antiphage Defense Systems in Cold-Adapted Bacteria with a Focus on CRISPR-Cas Systems
1
Ahmed Bargheet,
Claus Andreas Klingenberg,
Eirin Esaiassen,
Erik Hjerde,
Jorunn Pauline Cavanagh,
Johan Bengtsson-Palme
et al.:
Development of early life gut resistome and mobilome across gestational ages and microbiota-modifying treatments
1
Aitana Neves,
Isabel Cuesta,
Erik Hjerde,
Terje Klemetsen,
David Salgado,
Jacques van Helden
et al.:
FAIR+E pathogen data for surveillance and research: lessons from COVID-19
1
Animesh Kumar,
Espen Mikal Robertsen,
Nils Peder Willassen,
Juan Fu,
Erik Hjerde
:
Comparative analysis of HiSeq3000 and BGISEQ-500 sequencing platform with shotgun metagenomic sequencing data
1
Kenneth Lindstedt,
Dorota Julia Buczek,
Torunn Annie Pedersen,
Erik Hjerde,
Niclas Peter Raffelsberger,
Yutaka Suzuki
et al.:
Detection of Klebsiella pneumoniae human gut carriage: a comparison of culture, qPCR, and whole metagenomic sequencing methods
Gut microbes 31. August 2022
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1
Amudha Deepalakshmi Maharajan,
Erik Hjerde,
Hilde Hansen,
Nils P Willassen
:
Quorum Sensing Controls the CRISPR and Type VI Secretion Systems in Aliivibrio wodanis 06/09/139
Frontiers in Veterinary Science 2022
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ARKIV
1
Tracy Munthali Lunde,
Erik Hjerde,
Mohammed Al-Haroni
:
Prevalence, diversity and transferability of the Tn916-Tn1545 family ICE in oral streptococci
1
Adriana Maria Sanabria-Moreno,
Jessin Janice James Peter,
Erik Hjerde,
Gunnar Skov Simonsen,
Anne Merethe Hanssen
:
Shotgun-metagenomics based prediction of antibiotic resistance and virulence determinants in Staphylococcus aureus from periprosthetic tissue on blood culture bottles
1
Rasmus Goll,
Peter Holger Johnsen,
Erik Hjerde,
Joseph Diab,
Per Christian Valle,
Frank Hilpüsch
et al.:
Effects of fecal microbiota transplantation in subjects with irritable bowel syndrome are mirrored by changes in gut microbiome
Gut microbes 29. September 2020
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1
Adriana Maria Sanabria-Moreno,
Erik Hjerde,
Mona Johannessen,
Johanna U Ericson Sollid,
Gunnar Skov Simonsen,
Anne Merethe Hanssen
:
Shotgun-Metagenomics on Positive Blood Culture Bottles Inoculated With Prosthetic Joint Tissue: A Proof of Concept Study
Frontiers in Microbiology 2020
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ARKIV
1
Miriam Khider,
Erik Hjerde,
Hilde Hansen,
Nils Peder Willassen
:
Differential expression profiling of ΔlitR and ΔrpoQ mutants reveals insight into QS regulation of motility, adhesion and biofilm formation in Aliivibrio salmonicida
1
Jenny Johansson Söderberg,
Miriam Grgic,
Erik Hjerde,
Peik Haugen
:
Aliivibrio wodanis as a production host: development of genetic tools for expression of cold-active enzymes
Microbial Cell Factories 2019
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ARKIV
1
Trym Thune Flygel,
Evgeniya Sovershaeva,
Shantelle Classen-Weitz,
Erik Hjerde,
Kilaza S. Mwaikono,
Jon Øyvind Odland
et al.:
Composition of Gut Microbiota of Children and Adolescents With Perinatal Human Immunodeficiency Virus Infection Taking Antiretroviral Therapy in Zimbabwe
1
Maria Pain,
Erik Hjerde,
Claus Klingenberg,
Jorunn Pauline Cavanagh
:
Comparative Genomic Analysis of Staphylococcus haemolyticus Reveals Key to Hospital Adaptation and Pathogenicity
Frontiers in Microbiology 2019
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1
Miriam Khider,
Hilde Hansen,
Erik Hjerde,
Jostein a Johansen,
Nils Peder Willassen
:
Exploring the transcriptome of luxI-
and ΔainS mutants and the impact of N-3-oxo-hexanoyl-L- and N-3-hydroxy- decanoyl-L-homoserine lactones on biofilm formation in Aliivibrio salmonicida
1
Typhaine Le Doujet,
Concetta De Santi,
Terje Klemetsen,
Erik Hjerde,
Nils Peder Willassen,
Peik Haugen
:
Closely-related Photobacterium strains comprise the majority of bacteria in the gut of migrating Atlantic cod (Gadus morhua)
1
Victoria Dominguez Del Angel,
Erik Hjerde,
Lieven Sterck,
Salvador Capella-Gutiérrez,
Cederic Notredame,
Olga Vinnere Pettersson
et al.:
Ten steps to get started in Genome Assembly and Annotation
1
Vladimir Vimberg,
Jorunn Pauline Cavanagh,
Oldrich Benada,
Olga Kofranova,
Erik Hjerde,
Leona Zieglerova
et al.:
Teicoplanin resistance in Staphylococcus haemolyticus is associated with mutations in histidine kinases VraS and WalK
Diagnostic microbiology and infectious disease 2018
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1
Kidane M Tekle,
Sveinung Gundersen,
Kjetil Klepper,
Lars Ailo Bongo,
Inge Alexander Raknes,
Xiaxi Li
et al.:
Norwegian e-Infrastructure for Life Sciences (NeLS)
1
Eirin Esaiassen,
Erik Hjerde,
Jorunn Pauline Cavanagh,
Tanja Pedersen,
Jannicke Hanne Andresen,
Siren Rettedal
et al.:
Effects of Probiotic Supplementation on the Gut Microbiota and Antibiotic Resistome Development in Preterm Infants
1
Christian Karlsen,
Erik Hjerde,
Terje Klemetsen,
Nils Peder Willassen
:
Pan genome and CRISPR analyses of the bacterial fish pathogen Moritella viscosa
1
M. Guillermina Casabona,
Holger Kneuper,
Daniela Alferes de Lima,
Catriona P. Harkins,
Martin Zoltner,
Erik Hjerde
et al.:
Haem-iron plays a key role in the regulation of the ess/type VII secretion system of staphylococcus aureus RN6390
1
Eirin Esaiassen,
Erik Hjerde,
Jorunn Pauline Cavanagh,
Gunnar Skov Simonsen,
Claus Klingenberg
:
Bifidobacterium bacteremia: Clinical characteristics and a genomic approach to assess pathogenicity
Journal of Clinical Microbiology 2017
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1
Sunniva Katharina Thode,
Cecilie Bækkedal,
Jenny Johansson Söderberg,
Erik Hjerde,
Hilde Hansen,
Peik Haugen
:
Construction of a fur null mutant and RNA-sequencing provide deeper global understanding of the Aliivibrio salmonicida Fur regulon
1
Adele Kim Williamson,
Erik Hjerde,
Tim Kahlke
:
Analysis of the distribution and evolution of the ATP-dependent DNA ligases of bacteria delineates a distinct phylogenetic group 'Lig E'
1
Adele Kim Williamson,
Concetta De Santi,
Bjørn Altermark,
Christian Karlsen,
Erik Hjerde
:
Complete genome sequence of Halomonas sp. R5-57
1
Alexander Kashulin,
Henning Sørum,
Erik Hjerde,
Nils Peder Willassen
:
IS elements in Aliivibrio salmonicida LFI1238: Occurrence, variability and impact on adaptability
1
Erik Hjerde,
Christian Karlsen,
Henning Sørum,
Julian Parkhill,
Nils Peder Willassen,
Nicholas R. Thomson
:
Co-cultivation and transcriptome sequencing of two co-existing fish pathogens Moritella viscosa and Aliivibrio wodanis
1
Kåre Olav Holm,
Kristina Nilsson,
Erik Hjerde,
Nils Peder Willassen,
Debra L Milton
:
Complete genome sequence of Vibrio anguillarum strain NB10, a virulent isolate from the Gulf of Bothnia
Standards in Genomic Sciences 2015
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1
Gro Elin Kjæreng Bjerga,
Erik Hjerde,
Concetta De Santi,
Adele Kim Williamson,
Arne O. Smalås,
Nils Peder Willassen
et al.:
High quality draft genome sequence of Streptomyces sp. strain AW19M42 isolated from a sea squirt in Northern Norway
Standards in Genomic Sciences 01. March 2014
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1
Jorunn Pauline Cavanagh,
Erik Hjerde,
Matthew T.G. Holden,
Tim Kahlke,
Claus Klingenberg,
Trond Flægstad
et al.:
Whole-genome sequencing reveals clonal expansion of multiresistant Staphylococcus heamolyticus in European hopsitals
Journal of Antimicrobial Chemotherapy 2014
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ARKIV
1
Erik Hjerde,
Marcin Miroslaw Pierechod,
Adele Kim Williamson,
Gro Elin Kjæreng Bjerga,
Nils Peder Willassen,
Arne O. Smalås
et al.:
Draft Genome Sequence of the Actinomycete Rhodococcus sp. Strain AW25M09, Isolated from the Hadsel Fjord, Northern Norway
Microbiology Resource Announcements (MRA) 07. March 2013
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1
Eva katrin Bjørkeng,
Erik Hjerde,
Torunn Pedersen,
Arnfinn Sundsfjord,
Kristin Hegstad
:
ICESluvan, a 94-Kilobase Mosaic Integrative Conjugative Element Conferring Interspecies Transfer of VanB-Type Glycopeptide Resistance, a Novel Bacitracin Resistance Locus, and a ToxinAntitoxin Stabilization System
Journal of Bacteriology 2013
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1
Rafi Ahmad,
Geir Åsmund Hansen,
Hilde Hansen,
Erik Hjerde,
hege lynum Pedersen,
steinar Paulsen
et al.:
Prediction, microarray and northern blot analyses identify new intergenic small RNAs in aliivibrio salmonicida
Journal of Molecular Microbiology and Biotechnology 28. December 2012
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ARKIV
1
Bryndis Bjornsdottir,
Erik Hjerde,
Birkir Th. Bragason,
Thorunn Gudmundsdottir,
Nils Peder Willassen,
Bjarnheidur Gudmundsdottir
:
Identification of type VI secretion systems in Moritella viscosa
Veterinary Microbiology 2012
DOI /
ARKIV
1
Geir Åsmund Hansen,
Rafi Ahmad,
erik Hjerde,
Christopher Graham Fenton,
Nils Peder Willassen,
Peik Haugen
:
Expression profiling reveals Spot 42 small RNA as a key regulator in the central metabolism of Aliivibrio salmonicida
1
Kristoffer Lindell,
Anna Fahlgren,
Erik Hjerde,
Nils Peder Willassen,
Maria Fällman,
Debra L Milton
:
Lipopolysaccharide O-Antigen Prevents Phagocytosis of Vibrio anguillarum by Rainbow Trout (Oncorhynchus mykiss) Skin Epithelial Cells
1
Tim Kahlke,
Alexander Goesmann,
Erik Hjerde,
Nils Peder Willassen,
Peik Haugen
:
Unique core genomes of the bacterial family vibrionaceae: insights into niche adaptation and speciation
Korbinian Bösl,
Federico Bianchini,
Nazeefa Fatima,
Pedram A Keyvani,
Siri Kalhovd,
Kidane M Tekle
et al.:
End-to-end data management tool assembly for Norwegian life scientist
Korbinian Bösl,
Erik Hjerde,
Lars Figenschou,
erik axel Vollan,
Nils Peder Willassen
:
Workshop in Data Management for Life Science projects
Korbinian Bösl,
Fatemeh Ghavidel,
Kidane M Tekle,
Rune Kleppe,
Erik Hjerde,
Finn Drabløs
et al.:
End-to-End Data Management Toolkit for Norwegian Life Scientists
Adriana Maria Sanabria-Moreno,
Gunnar Skov Simonsen,
Mona Johannessen,
Johanna U Ericson Sollid,
Erik Hjerde,
Anne Merethe Hanssen
:
Metagenomics on prosthetic joint tissue samples inoculated in blood culture bottles: a proof of concept study
Adriana Maria Sanabria-Moreno,
Gunnar Skov Simonsen,
Johanna U Ericson Sollid,
Mona Johannessen,
Anne Merethe Hanssen,
Erik Hjerde
:
Metagenomics on prosthetic joint tissue samples inoculated in blood culture bottles
Adele Kim Williamson,
Erik Hjerde,
Aili Sarre,
Ingar Leiros,
Kristel Berg,
Hanna-Kirsti S. Leiros
:
Discovery and design of novel DNA ligases for biotechnology
Adele Kim Williamson,
Erik Hjerde,
Hanna-Kirsti S. Leiros,
Kjersti Lian,
Miguel A. Ramirez,
Wayne M. Patrick
:
Beyond T4: discovery and design of DNA ligases for use in biotechnological applications
Adele Kim Williamson,
Tim Kahlke,
Erik Hjerde,
Hanna-Kirsti S. Leiros
:
Structural and Bioinformatic Studies of the ‘Lig E’Group of Bacterial ATP-Dependent DNA Ligases
Eirin Esaiassen,
Pauline Cavanagh,
Erik Hjerde,
Gunnar Skov Simonsen,
Ragnhild Støen,
Claus Klingenberg
:
Bifidobacterium longum subspecies infantis bacteremia in 3 extremely preterm infants receiving probiotics
Emerging Infectious Diseases 2016
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Adele Kim Williamson,
Hanna-Kirsti S. Leiros,
Erik Hjerde,
Kjersti Lian,
Miguel A. Ramirez,
Wayne M. Patrick
:
Beyond T4: discovery and design of DNA ligases for use in biotechnological applications
hege lynum Pedersen,
Bjørn Altermark,
Erik Hjerde,
Adele Kim Williamson,
Marcin Miroslaw Pierechod,
Gro Elin Kjæreng Bjerga
et al.:
Genome Sequencing of Bacteria Isolated from the Arctic Marine Environment