Bilde av Ahmad, Rafi
Bilde av Ahmad, Rafi
Clinical bioinformatics rafi.ahmad@uit.no

Rafi Ahmad


Bioinformatics and Drug Discovery

Job description

More information here

https://www.inn.no/om-hoegskolen/ansatte/rafi-ahmad


  • Jawad Ali, Mukund Joshi, Asal Ahmadi, Knut Olav Strætkvern, Rafi Ahmad :
    Increased growth temperature and vitamin B12 supplementation reduces the lag time for rapid pathogen identification in BHI agar and blood cultures
    F1000 Research 2023 ARKIV / DATA / DOI
  • Ekaterina Avershina, Abdolrahman Khezri, Rafi Ahmad :
    Clinical Diagnostics of Bacterial Infections and Their Resistance to Antibiotics—Current State and Whole Genome Sequencing Implementation Perspectives
    Antibiotics 2023 ARKIV / DOI
  • Asal Ahmadi, Abdolrahman Khezri, Håvard Nørstebø, Rafi Ahmad :
    A culture-, amplification-independent, and rapid method for identification of pathogens and antibiotic resistance profile in bovine mastitis milk
    Frontiers in Microbiology 2023 ARKIV / DOI
  • Sathi Das, Kanchan Saxena, Jean-Claude Tinguely, Arijit Pal, Nima L. Wickramasinghe, Abdolrahman Khezri et al.:
    SERS Nanowire Chip and Machine Learning-Enabled Classification of Wild-Type and Antibiotic-Resistant Bacteria at Species and Strain Levels
    ACS Applied Materials & Interfaces 2023 DOI
  • Sathi Das, Kanchan Saxena, Abdolrahman Khezri, Vishesh Kumar Dubey, Azeem Ahmad, Jean-Claude Tinguely et al.:
    Rapid identification of antimicrobial drug resistance strains of E-coli using SERS nanowire chip
    Proceedings of SPIE, the International Society for Optical Engineering 16. March 2023 ARKIV / DOI
  • Azeem Ahmad, Ramith Hettiarachchi, Abdolrahman Khezri, Balpreet Singh Ahluwalia, Dushan Wadduwage, Rafi Ahmad :
    Highly sensitive quantitative phase microscopy and deep learning aided with whole genome sequencing for rapid detection of infection and antimicrobial resistance
    Frontiers in Microbiology 2023 ARKIV / DOI
  • Niall Hanrahan, Adam Lister, Callum Highmore, Leena Rajith, Ekaterina Avershina, Jawad Ali et al.:
    Enhanced Raman techniques for infection diagnostics
    Proceedings of SPIE, the International Society for Optical Engineering 2022 DOI
  • Yusuf Khan, Daniel Hammarström, Stian Ellefsen, Rafi Ahmad :
    Normalization of gene expression data revisited: the three viewpoints of the transcriptome in human skeletal muscle undergoing load-induced hypertrophy and why they matter
    BMC Bioinformatics 2022 ARKIV / DOI
  • Ekaterina Avershina, Stephan Alfons Frye, jawad ali, Arne Michael Taxt, Rafi Ahmad :
    Ultrafast and Cost-Effective Pathogen Identification and Resistance Gene Detection in a Clinical Setting Using Nanopore Flongle Sequencing
    Frontiers in Microbiology 2022 FULLTEKST / DOI
  • Ekaterina Avershina, Priyanka Sharma, Arne Michael Taxt, Harpreet Singh, Stephan Alfons Frye, Kolin Paul et al.:
    AMR-Diag: Neural network based genotype-to-phenotype prediction of resistance towards β-lactams in Escherichia coli and Klebsiella pneumoniae
    Computational and Structural Biotechnology Journal 2021 ARKIV / DOI
  • Knut Sindre Mølmen, Jens Konrad Daniel Hammarström, Karianne Pedersen, Anne Cecilie Lian Lie, Ragnvald B. Steile, Håvard Nygård et al.:
    Vitamin D3 supplementation does not enhance the effects of resistance training in older adults
    Journal of Cachexia, Sarcopenia and Muscle 2021 ARKIV / FULLTEKST / DOI
  • Knut Sindre Mølmen, Jens Konrad Daniel Hammarström, Gunnar Slettaløkken Falch, Morten Grundtvig, Lise Koll, Marita Hanestadhaugen et al.:
    Chronic obstructive pulmonary disease does not impair responses to resistance training
    Journal of Translational Medicine 2021 FULLTEKST / ARKIV / DOI
  • Abdolrahman Khezri, Ekaterina Avershina, Rafi Ahmad :
    Hybrid Assembly Provides Improved Resolution of Plasmids, Antimicrobial Resistance Genes, and Virulence Factors in Escherichia coli and Klebsiella pneumoniae Clinical Isolates
    Microorganisms 2021 FULLTEKST / ARKIV / DOI
  • Maria Vittoria Modica, Rafi Ahmad, Stuart Ainsworth, Gregor Anderluh, Agostinho Antunes, Dimitris Beis et al.:
    The new COST Action European Venom Network (EUVEN)—synergy and future perspectives of modern venomics
    GigaScience 2021 ARKIV / DOI
  • Abdolrahman Khezri, Birgitte Narud, Else-Berit Stenseth, Teklu Tewoldebrhan Zeremichael, Frøydis Deinboll Myromslien, Robert Charles Wilson et al.:
    Sperm DNA Hypomethylation Proximal to Reproduction Pathway Genes in Maturing Elite Norwegian Red Bulls
    Frontiers in Genetics 2020 ARKIV / DOI
  • Arne Michael Taxt, Ekaterina Avershina, Stephan Alfons Frye, Mohammed Umaer Naseer, Rafi Ahmad :
    Rapid identification of pathogens, antibiotic resistance genes and plasmids in blood cultures by nanopore sequencing
    Scientific Reports 2020 ARKIV / DOI
  • Yusuf Khan, Jens Konrad Daniel Hammarström, Bent Rønnestad, Stian Ellefsen, Rafi Ahmad :
    Increased biological relevance of transcriptome analyses in human skeletal muscle using a model-specific pipeline
    BMC Bioinformatics 2020 FULLTEKST / ARKIV / DOI
  • Abdolrahman Khezri, Ekaterina Avershina, Rafi Ahmad :
    Plasmid Identification and Plasmid-Mediated Antimicrobial Gene Detection in Norwegian Isolates
    Microorganisms 2020 ARKIV / FULLTEKST / DOI
  • Jasmine Kaur, Arun Sharma, Ajay Singh Dhama, Harish Buttolia, V.C. Ohri, Kamini Walia et al.:
    Developing a hybrid antimicrobial resistance surveillance system in India: Needs & challenges
    Indian Journal of Medical Research (IJMR) 2019 ARKIV / FULLTEKST / DOI
  • Rafi Ahmad :
    What is AMR-Educate?
    2023
  • Rafi Ahmad :
    Novel technological solutions for rapid diagnostics of infection and antimicrobial resistance
    2023
  • Rafi Ahmad :
    Novel technological solutions for rapid diagnostics of infection and antimicrobial resistance:A One Health approach
    2023
  • Rafi Ahmad :
    Transforming Research, Education, and Innovation in Antimicrobial Resistance
    2023
  • Rafi Ahmad :
    Novel technological solutions for rapid diagnostics of infection and antimicrobial resistance:A One Health approach
    2023
  • Rafi Ahmad :
    A culture-amplification-independent, and rapid method for identification of pathogens and antibiotic resistance profile in bovine mastitis milk
    2023
  • Rafi Ahmad :
    AMR-Educate: Current Status and plans forward
    2023
  • Crystal Chapagain, Jawad Ali, Sverre Branders, Rafi Ahmad :
    Rapid Detection of Pathogens and Antimicrobial Resistance in Urine Using Nanopore Sequencing
    2023
  • Rafi Ahmad :
    Presentation of AMR-Educate project
    2022
  • Rafi Ahmad :
    Novel technological solutions for rapid diagnostics of Infection and Antimicrobial resistance: test cases from human and animal health
    2022
  • Rafi Ahmad :
    AMR-Diag: Neural network based genotype-to-phenotype prediction of resistance towards β-lactams in Escherichia coli and Klebsiella pneumoniae
    2021
  • Rafi Ahmad :
    AMR-Diag Project Personalized Rapid Diagnostics of bacterial infection and antibiotic resistance
    2021
  • Rafi Ahmad :
    Personalized Healthcare: Bioinformatics & Drug Discovery Perspective
    2021
  • Rafi Ahmad :
    Rapid-Diag Project Personalized Rapid Diagnostics of bacterial infection and antibiotic resistance
    2021
  • Rafi Ahmad :
    Rapid-Diag Project Personalized Rapid Diagnostics of bacterial infection and antibiotic resistance [Engelsk]
    2021
  • Maria Vittoria Modica, Rafi Ahmad, Stuart Ainsworth, Gregor Anderluh, Agostinho Antunes, Dimitris Beis et al.:
    Corrigendum to: The new COST Action European Venom Network (EUVEN)-synergy and future perspectives of modern venomics
    GigaScience 2021 DOI
  • Mukund Joshi, Rafi Ahmad, Knut Olav Strætkvern :
    Testing of different conditions to accelerate culturing and potentially reduce the time of detection of pathogens and antimicrobial resistance.
    2021
  • Rafi Ahmad, Arne Michael Taxt, Ekaterina Avershina, Stephan Alfons Frye, Mohammed Umaer Naseer :
    Rapid identification of pathogens, antibiotic resistance genes and plasmids in blood cultures by nanopore sequencing
    2020
  • Ambreen Kauser, Avershina Ekaterina, Rafi Ahmad :
    Resistome Identification of Whole Genome Sequencing Data of Norwegian Isolates
    Høgskolen i Hedmark 2020
  • Rafi Ahmad, Arne Michael Taxt, Ekaterina Avershina, Stephan Alfons Frye, Mohammed Umaer Naseer :
    Rapid identification of pathogens, antibiotic resistance genes and plasmids in blood cultures by nanopore sequencing
    2020
  • Hélène Clémentine Bouras, Frank Larsen, Rafi Ahmad :
    Rapid diagnostics and better clinical management of bacterial infections: Antibiotic susceptibility testing of clinical isolates and exploration of the different techniques for bacterial enrichment in spiked whole blood.
    Høgskolen i Hedmark 2020
  • Rafi Ahmad :
    Vil redusere overforbruk av antibiotika og gi legene raskere prøvesvar
    16. May 2020 FULLTEKST
  • Rafi Ahmad :
    Hva er risikoen for at du får i deg resistente bakterier i mat fra utlandet?
    10. November 2020 FULLTEKST
  • Rafi Ahmad :
    Clinical application of resistome data for rapid diagnostics of bacterial infection and antimicrobial resistance
    2020
  • Rafi Ahmad :
    Role of surveillance in diagnostics of antimicrobial resistance
    2019
  • Abdolrahman Khezri, Birgitte Narud, Else-Berit Stenseth, Frøydis Deinboll Myromslien, Ann Helen Gaustad, Robert Charles Wilson et al.:
    DNA methylation patterns differ in boar sperm cells with high and low DNA fragmentation index
    2019
  • Rafi Ahmad :
    Rapid Diagnostics for effective clinical management of bacterial infection and antimicrobial resistance
    2019
  • Rafi Ahmad :
    AMR-Diag - et sanntids- og kostnadseffektivt diagnostisk verktøy for påvisning av antibakteriell resistens
    2019
  • Rafi Ahmad :
    En Helse Antimikrobell resistens
    14. November 2019 DATA
  • Rafi Ahmad :
    Norsk antibiotika-forskning kan være med og redde tusenvis av liv
    15. November 2019 FULLTEKST
  • Rafi Ahmad :
    AMR-Diag prosjekt på NRK Dagsrevyen
    14. November 2019 DATA

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