Zolotarov, G., Fromm, B., Legnini, I., Ayoub, S., Polese, G., Maselli, V., Chabot, P. J., Vinther, J., Styfhals, R., Seuntjens, E., Cosmo, A. D., Peterson, K. J., & Rajewsky, N. (2022). "MicroRNAs are deeply linked to the emergence of the complex octopus brain". Science Advances, 8(47), eadd9938. November
Fromm, B., & Sorger, T. (2022). "Rapid Adaption of Cellular Metabolic Rate to the microRNA Complements of Mammals". In bioRxiv (p. 2022.11.24.517858). November
Umu, S. U., Trondsen, H., Paynter, V. M., Buschmann, T., Rounge, T. B., Peterson, K. J., & Fromm, B. (2022). "Accurate microRNA annotation of animal genomes using trained covariance models of curated microRNA complements in MirMachine". In bioRxiv (p. 2022.11.23.517654). November
Jenike, A. E., Jenike, K. M., Peterson, K. J., Fromm, B., & Halushka, M. K. (2022). "Direct observation of the evolution of cell-type specific microRNA expression signatures supports the hematopoietic origin model of endothelial cells". In bioRxiv (p. 2022.11.23.517662).  November
Fromm, B., Patil, AH & Halushka, MK, 2022. Comment on " A Novel Circulating MicroRNA for the Detection of Acute Myocarditis ". The New England Journal of Medicine387 (13), pp.1240-1240.  September        

Schiffer, P. H., Natsidis, P., Leite, D. J., Robertson, H., Lapraz, F., Marlétaz, F., Fromm, B., Baudry, L., Simpson, F., Høye, E., Zakrzewski, A.-C., Kapli, P., Hoff, K. J., Mueller, S., Marbouty, M., Marlow, H., Copley, R. R., Koszul, R., Sarkies, P., & Telford, M. J. (2022)." The slowly evolving genome of the xenacoelomorph worm Xenoturbella bocki ". In bioRxiv (p. 2022.06.24.497508). 


Aparicio-Puerta, E., Gómez-Martín, C., Giannoukakos, S., Medina, J. M., Scheepbouwer, C., García-Moreno, A., Carmona-Saez, P., Fromm, B., Pegtel, M., Keller, A., Marchal, J. A., & Hackenberg, M. (2022)." sRNAbench and sRNAtoolbox 2022 update: accurate miRNA and sncRNA profiling for model and non-model organisms ". Nucleic Acids Research


Fromm, B., Zhong, X., Tarbier, M., Friedländer, M. R., & Hackenberg, M. (2022)." The Limits of Human MicroRNA Annotation Have Been Met  ". RNA , 28(6), 781–785.


Høye, E., Fromm, B., Böttger, P. H. M., Domanska, D., Torgunrud, A., Lund-Andersen, C., Abrahamsen, T. W., Fretland, Å. A., Dagenborg, V. J., Lorenz, S., Edwin, B., Hovig, E., & Flatmark, K. (2022). "A Comprehensive Framework for Analysis of MicroRNA Sequencing Data in Metastatic Colorectal Cancer " NAR Cancer, 4(1), zcab051.


Zolotarov, G., Fromm, B., Legnini, I., Ayoub, S., Polese, G., Maselli, V., Chabot, P. J., Vinther, J., Styfhals, R., Seuntjens, E., Di Cosmo, A., Peterson, K. J., & Rajewsky, N. (2022). “MicroRNAs Are Deeply Linked to the Emergence of the Complex Octopus Brain”.  In bioRxiv (p. 2022.02.15.480520).


Peterson, K. J., Beavan, A., Chabot, P. J., McPeek, M. A., Pisani, D., Fromm, B., & Simakov, O. (2022).“MicroRNAs as Indicators into the Causes and Consequences of Whole-Genome Duplication Events”. Molecular Biology and Evolution, 39(1). 



Patil, A. H., Halushka, M. K., & Fromm, B. (2021)." No evidence of paralogous loci or new bona fide microRNAs in telomere to telomere (T2T) genomic data ". In bioRxiv (p. 2021.12.09.471935). 


Kang, W., Fromm, B., Houben, A. J., Høye, E., Bezdan, D., Arnan, C., Thrane, K., Asp, M., Johnson, R., Biryukova, I., & Friedländer, M. R. (2021). “ MapToCleave: High-Throughput Profiling of MicroRNA Biogenesis in Living Cells ” . Cell Reports, 37(7), 110015.