Bilde av Pospíšil, Jakub
Bilde av Pospíšil, Jakub
Department of Medical Biology You can find me here

Jakub Pospíšil

Postdoctoral research fellow

  • Mélanie T. M. Hannebelle, Esther Raeth, Samuel M. Leitao, Tomáš Lukeš, Jakub Pospisil, Chiara Toniolo et al.:
    Open-source microscope add-on for structured illumination microscopy
    Nature Communications 2024 DOI

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    Publications outside Cristin


    • J. Pospíšil, G. Wiebusch, K. Fliegel, M. Klíma, T. Huser, “Highly compact and cost-effective 2-beam super-resolution structured illumination microscope based on all-fiber optic components,” Optics Express. 2021, 29(8), 11833-11844. ISSN 1094-4087.
    • C. Pilger, J. Pospíšil, M. Müller, M. Ruoff, M. Schütte, H. Spiecker, T. Huser, “Super-resolution fluorescence microscopy by line-scanning with an unmodified two-photon microscope,” Phil. Trans. R. Soc. A. 2021, 379(20200300), 1–11. ISSN 1364-503X.


    • J. Pospíšil, T. Lukeš, J. Bendesky, K. Fliegel, K. Spendier, GM Hagen, “Imaging tissues and cells beyond the diffraction limit with structured illumination microscopy and Bayesian image reconstruction,” GigaScience. 2019, 8(1), 1-12. ISSN 2047-217X.


    • T. Lukeš, J. Pospíšil, K. Fliegel, T. Lasser, GM Hagen, “Quantitative super-resolution single molecule microscopy dataset of YFP-tagged growth factor receptors,” GigaScience. 2018, 7(3), 1-10. ISSN 2047-217X.
    • P. Janout, J. Pospíšil, K. Fliegel, M. Klíma, P. Páta, “Interpolation methods for the improvement of the point spread function estimation,” In: 2018 28th International Conference Radioelektronika. IEEE (Institute of Electrical and Electronics Engineers), 2018. ISBN 978-1-5386-2485-2.
    • J. Pospíšil, K. Fliegel, J. Švihlík, M. Klíma, “Comparison of resolution estimation methods in optical microscopy,” In: Proceedings Volume 10752 – Applications of Digital Image Processing XLI. Bellingham: SPIE, 2018. SPIE PROCEEDINGS. Vol. 10752. ISSN 1996-756X. ISBN 9781510620766.
    • A. Willème, S. Mahmoudpour, I. Viola, K. Fliegel, J. Pospíšil, T. Ebrahimi, P. Schelkens, A. Descampe, et al. "Overview of the JPEG XS core coding system subjective evaluations," In: Proceedings Volume 10752 - Applications of Digital Image Processing XLI. Bellingham: SPIE, 2018. pp. 107521M-1-107521M-12. SPIE PROCEEDINGS. Vol. 10752. ISSN 0277-786X. ISBN 9781510620759.


    • J. Pospíšil, K. Fliegel, M. Klíma, “Phase estimation of illumination pattern in structured illumination microscopy,” in 2017 27th International Conference Radioelektronika (RADIOELEKTRONIKA). Brno: VUT v Brně, FEKT, Ústav radioelektroniky, 2017. pp. 174-177. ISBN 978-1-5090-4591-4.
    • J. Pospíšil, K. Fliegel, M. Klíma, “Analysis of image reconstruction artifacts in structured illumination microscopy,” in Applications of Digital Image Processing XL. Bellingham: SPIE, 2017. pp. 1039632-1-1039632-13. Proceedings of SPIE. ISSN 0277-786X. ISBN 978-1-5106-1249-5.
    • J. Pospíšil, K. Fliegel, M. Klíma, “Assessing resolution in live cell structured illumination microscopy“, in Photonics, Devices, and Systems VII. Bellingham: SPIE, 2017. pp. 106030D-1-106030D-7. Proceedings of SPIE. Vol. 10603. ISSN 0277-786X. ISBN 978-1-5106-1702-5.


    • M. Novotný, J. Pospíšil, R. Čmejla, J. Rusz, “Automatic detection of voice onset time in dysarthric speech“, in 2015 IEEE International Conference on Acoustics, Speech, and Signal Processing – Proceedings. New Jersey: IEEE Signal Processing Society, 2015. pp. 4340-4344. ISSN 1520-6149. ISBN 978-1-4673-6997-8.

    Research interests

    • Liver sinusoidal endothelial cells (LSECs)
    • Super-resolution structured illumination microscopy (SR-SIM)
    • Image processing

    Scopus Author ID:  55424670500
    Google Scholar: Jakub Pospíšil


    Member of project


    Jakub Pospíšil was born in Jinřichův Hradec, Czech Republic in 1990. He graduated from the High School of Electrical Engineering in Třebíč, specialization Electronic Computer Systems, in 2010. After that, he obtained the Electrical Engineering degree (M.Sc.) with distinction in Radioelectronics, specialization in Communication, Multimedia and Electronics from the Czech Technical University in Prague (CTU), Faculty of Electrical Engineering (FEE) in 2015.

    He enrolled in the doctoral study program at the CTU FEE in 2015 and defended his doctoral thesis entitled "Compact structured illumination microscopy and performance evaluation in live cell super-resolution imaging" in 2022.

    Jakub Pospíšil has joined the Vascular Biology Research Group (VBRG), Department of Medical Biology, UiT The Arctic University of Norway in July 2022 where he works as a postdoctoral research fellow.